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3d image stacks in imaris  (Oxford Instruments)


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    Structured Review

    Oxford Instruments 3d image stacks in imaris
    3d Image Stacks In Imaris, supplied by Oxford Instruments, used in various techniques. Bioz Stars score: 99/100, based on 44196 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/3d+images/Imaris/pmc13123337-311-1-5
    Average 99 stars, based on 44196 article reviews
    3d image stacks in imaris - by Bioz Stars, 2026-09
    99/100 stars

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    Related Articles

    other:

    Article Title: Distinct modes of dopamine modulation on striatopallidal synaptic transmission
    Article Snippet: Fig. 4 The distinct spatial localization and distribution of presynaptic D2Rs and postsynaptic D4Rs in the GPe subregions may contribute to the region-specific dopaminergic modulation of striatopallidal transmission. a A schematic illustration describing the injection of AAV5-hSyn-Flex-mGFP-2A-Synaptophysin-mRuby virus into the striatum of Adora2A-Cre mice to selectively label striatopallidal axons and terminals. b A schematic illustration depicting fluorescently labeled striatopallidal axons (GFP), axon terminals (RFP), and D2Rs on iMSNs. c Representative enhanced confocal images of striatopallidal axons, axon terminals, and D2Rs in the GPe subregions. d Summary statistics of D2R+ area (n (images/mice): (95/9) per GPe subgroup, two-tailed unpaired t -test; p = 0.002), D2R+ area colocalized with RFP+ area (n (images/mice): DL-VM GPe (95/9), VL-DM GPe (93/9), two-tailed unpaired t -test; p = 0.0075), D2R+ area colocalized with GFP+ area ( n (images/mice): DL-VM GPe (76/9), VL-DM GPe (108/9), two-tailed unpaired t -test; p = 0.0163), D2R+ area colocalized with GFP+ or RFP+ area ( n (images/mice): DL-VM GPe (92/9), VL-DM GPe (103/9), two-tailed unpaired t -test; p = 0.0415), and GFP+ area ( n (images/mice): DL-VM GPe (96/9), VL-DM GPe (99/9), two-tailed unpaired t -test; p = 0.2423). e Cumulative plots for the nearest neighbor distance from striatopallidal axon terminals (RFP+) to D2Rs on striatopallidal axons or axon terminals (D2R+ RFP+ or D2R+ GFP+) (n (images/mice): DL-VM GPe (92/9), VL-DM GPe (103/9)). f A schematic illustration depicting fluorescently labeled striatopallidal axons (RFP) in the GPe, projected from iMSNs of Adora2A-Cre;Ai9 mice. g A schematic illustration describing fluorescently labeled striatopallidal axons (RFP), GABA A Rs, and D4Rs in the GPe of Adora2A-Cre; Ai9 mice. h Representative enhanced confocal images, restructured 3D images by IMARIS, and centerpoints of GABA A Rs and D4Rs in the GPe subregions. i Summary statistics of D4R+ fluorescence volume ( n (images/mice): DL-VM GPe (47/6), VL-DM GPe (52/6), two-tailed unpaired t -test; p = 0.0031) and number ( p < 0.0001). j Summary statistics of GABA A R+ fluorescence volume (n (images/mice): DL-VM GPe (47/6), VL-DM GPe (52/6), two-tailed unpaired t -test; p = 0.9442) and number ( p = 0.9979). k Cumulative plots for the nearest neighbor distance from postsynaptic GABA A Rs to postsynaptic D4Rs in the GPe.


    Article Title: Distinct modes of dopamine modulation on striatopallidal synaptic transmission.
    Article Snippet: Fig. 4 | The distinct spatial localization and distribution of presynaptic D2Rs and postsynaptic D4Rs in the GPe subregions may contribute to the region-specific dopaminergic modulation of striatopallidal transmission a, A schematic illustration describing the injection of AAV5-hSyn-Flex-mGFP-2ASynaptophysin-mRuby virus into the striatum of Adora2A-Cre mice to selectively label striatopallidal axons and terminals. b, A schematic illustration depicting fluorescently labeled striatopallidal axons (GFP), axon terminals (RFP), and D2Rs on iMSNs. c, Representative enhanced confocal images of striatopallidal axons, axon terminals, and D2Rs in the GPe subregions. d, Summary statistics of D2R+ area (n (images/mice): (95/9) per GPe subgroup, twotailed unpaired t-test; p = 0.002), D2R+ area colocalized with RFP+ area (n (images/mice): DLVM GPe (95/9), VL-DM GPe (93/9), two-tailed unpaired t-test; p = 0.0075), D2R+ area AR TI CL E IN P RE SS colocalized with GFP+ area (n (images/mice): DL-VM GPe (76/9), VL-DM GPe (108/9), twotailed unpaired t-test; p = 0.0163), D2R+ area colocalized with GFP+ or RFP+ area (n (images/mice): DL-VM GPe (92/9), VL-DM GPe (103/9), two-tailed unpaired t-test; p = 0.0415), and GFP+ area (n (images/mice): DL-VM GPe (96/9), VL-DM GPe (99/9), two-tailed unpaired ttest; p = 0.2423). e, Cumulative plots for the nearest neighbor distance from striatopallidal axon terminals (RFP+) to D2Rs on striatopallidal axons or axon terminals (D2R+ RFP+ or D2R+ GFP+) (n (images/mice): DL-VM GPe (92/9), VL-DM GPe (103/9)). f, A schematic illustration depicting fluorescently labeled striatopallidal axons (RFP) in the GPe, projected from iMSNs of Adora2ACre;Ai9 mice. g, A schematic illustration describing fluorescently labeled striatopallidal axons (RFP), GABAARs, and D4Rs in the GPe of Adora2A-Cre;Ai9 mice. h, Representative enhanced confocal images, restructured 3D images by IMARIS, and centerpoints of GABAARs and D4Rs in the GPe subregions. i, Summary statistics of D4R+ fluorescence volume (n (images/mice): DLVM GPe (47/6), VL-DM GPe (52/6), two-tailed unpaired t-test; p = 0.0031) and number (p < 0.0001). j, Summary statistics of GABAAR+ fluorescence volume (n (images/mice): DL-VM GPe (47/6), VL-DM GPe (52/6), two-tailed unpaired t-test; p = 0.9442) and number (p = 0.9979). k, Cumulative plots for the nearest neighbor distance from postsynaptic GABAARs to postsynaptic D4Rs in the GPe.

    Software:

    Article Title: 3-Dimensional reconstruction reveals frequent intraluminal growth of submucosal veins in surgically resected pT1 colorectal cancers.
    Article Snippet: The resulting continuous z-stack images were processed as single-layer images using Zen 2012 SP5 software (Carl Zeiss). .. Subsequently, the images were reconstructed into 3D images using IMARIS 9.8.0 software (Bitplane, Zurich, Switzerland) with each fluorescent signal rendered to distinctly visualize out-of-focus regions. ..

    Construct:

    Article Title: CCL5 enhances invasion of squamous cell carcinoma via syndecan-1-dependent ERK signaling.
    Article Snippet: .. Briefly, we constructed 3D images of spheroids using Imaris software (Bitplane AG, Zurich, Switzerland). ..



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